If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 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'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 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'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 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'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 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'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 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'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 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'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 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'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 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'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 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'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 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'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 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'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 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'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ), 'gf_id' => 'HOM05D000543', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000543' ), 'data_identifier' => 'HOM05D000543', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000543', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1007', 'num_species' => '97' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A02p13240' => 'bna', 'A02p21030' => 'bna', 'A03p01420' => 'bna', 'A03p26530' => 'bna', 'A04p21030' => 'bna', 'A06p14160' => 'bna', 'A06p28740' => 'bna', 'A07p18290' => 'bna', 'A07p32850' => 'bna', 'A07p42500' => 'bna', 'A09p60090' => 'bna', 'A10p32270' => 'bna', 'Aa31LG11G1490' => 'aar', 'Aa31LG1G21430' => 'aar', 'Aa31LG1G22030' => 'aar', 'Aa31LG2G2490' => 'aar', 'Aa31LG5G8330' => 'aar', 'Aa31LG7G2970' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_228.5820' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1791' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2871' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2902' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_362.2755' => 'aag', 'Actinidia03239' => 'ach', 'Actinidia05439' => 'ach', 'Actinidia07241' => 'ach', 'Actinidia09079' => 'ach', 'Actinidia14322' => 'ach', 'Actinidia31351' => 'ach', 'Actinidia32875' => 'ach', 'Actinidia34098' => 'ach', 'Actinidia35459' => 'ach', 'Actinidia37084' => 'ach', 'Actinidia40008' => 'ach', 'Ah.02g112880' => 'amhyb', 'Ah.04g159300' => 'amhyb', 'Ah.07g207360' => 'amhyb', 'Ah.08g215790' => 'amhyb', 'Ah.13g068430' => 'amhyb', 'AL1G30480' => 'aly', 'AL2G22180' => 'aly', 'AL4G22830' => 'aly', 'AL5G38330' => 'aly', 'AL6G13410' => 'aly', 'AL7G33520' => 'aly', 'AL8G38810' => 'aly', 'Aqoxy1G03873' => 'aox', 'Aqoxy1G03918' => 'aox', 'Aqoxy2G01212' => 'aox', 'Aqoxy2G04117' => 'aox', 'Aqoxy3G00123' => 'aox', 'Aqoxy4G02798' => 'aox', 'Aqoxy7G00413' => 'aox', 'arahy.Tifrunner.gnm1.ann1.02PX6U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2I11L4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4GAQ4U' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.5H2LSK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9K247M' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9X2P9A' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.BBG51B' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CIFX90' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DYRS20' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E8V3SA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EM6VH3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FFIH3X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.FW8Z6T' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.G6F3P2' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I7DBCX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.IZ8FG5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.JQBA31' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.L2SG6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.LUT2QN' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M2THPA' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.MKP2FL' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NBC3HK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.PBX2T9' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S8RL65' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SB1I92' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.T6PK46' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TCE5WS' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V0UB6N' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VGT3DW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VQ1Q3Q' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.XGVA1E' => 'arhy', 'AT1G18100' => 'ath', 'AT1G65480' => 'ath', 'AT2G27550' => 'ath', 'AT4G20370' => 'ath', 'AT5G03840' => 'ath', 'AT5G62040' => 'ath', 'ATR0081G024' => 'atr', 'ATR0598G198' => 'atr', 'ATR0693G228' => 'atr', 'ATR0743G029' => 'atr', 'ATR0743G124' => 'atr', 'ATR0743G228' => 'atr', 'Atru.chr1.487' => 'acertr', 'Atru.chr11.1089' => 'acertr', 'Atru.chr12.1642_Atru.chr12.1636' => 'acertr', 'Atru.chr3.3285' => 'acertr', 'Atru.chr8.1559' => 'acertr', 'Atru.chr8.1563' => 'acertr', 'Atru.chr9.1762' => 'acertr', 'AUR62000271' => 'cqu', 'AUR62006619' => 'cqu', 'AUR62009771' => 'cqu', 'AUR62010060' => 'cqu', 'AUR62012495' => 'cqu', 'AUR62012496' => 'cqu', 'AUR62013052' => 'cqu', 'AUR62014698' => 'cqu', 'AUR62014699' => 'cqu', 'AUR62016010' => 'cqu', 'AUR62021217' => 'cqu', 'AUR62026237' => 'cqu', 'AUR62026245' => 'cqu', 'AUR62026433' => 'cqu', 'AUR62026435' => 'cqu', 'AUR62026436' => 'cqu', 'AUR62026437' => 'cqu', 'AUR62028545' => 'cqu', 'AUR62029959' => 'cqu', 'AUR62033497' => 'cqu', 'AUR62033889' => 'cqu', 'AUR62039216' => 'cqu', 'AUR62039217' => 'cqu', 'BcaB01g03078' => 'bca', 'BcaB01g05783' => 'bca', 'BcaB02g09616' => 'bca', 'BcaB02g10096' => 'bca', 'BcaB03g15333' => 'bca', 'BcaB05g21801' => 'bca', 'BcaB05g24119' => 'bca', 'BcaB06g28155' => 'bca', 'BcaB07g31830' => 'bca', 'BcaC01g04948' => 'bca', 'BcaC02g08240' => 'bca', 'BcaC02g10891' => 'bca', 'BcaC02g11065' => 'bca', 'BcaC03g12979' => 'bca', 'BcaC03g14707' => 'bca', 'BcaC03g15718' => 'bca', 'BcaC05g25705' => 'bca', 'BcaC06g32088' => 'bca', 'BcaC07g41344' => 'bca', 'BcaC08g47191' => 'bca', 'BolC2t06121H' => 'bol', 'BolC2t08279H' => 'bol', 'BolC2t09442H' => 'bol', 'BolC3t12730H' => 'bol', 'BolC3t15524H' => 'bol', 'BolC3t18753H' => 'bol', 'BolC4t23625H' => 'bol', 'BolC4t23898H' => 'bol', 'BolC4t27218H' => 'bol', 'BolC5t30340H' => 'bol', 'BolC6t39000H' => 'bol', 'BolC6t40130H' => 'bol', 'BolC8t51899H' => 'bol', 'BolC9t60044H' => 'bol', 'BraA02t04787Z' => 'bra', 'BraA02t06380Z' => 'bra', 'BraA03t09521Z' => 'bra', 'BraA03t11866Z' => 'bra', 'BraA04t17671Z' => 'bra', 'BraA06t24548Z' => 'bra', 'BraA06t25815Z' => 'bra', 'BraA07t29545Z' => 'bra', 'BraA07t30912Z' => 'bra', 'BraA07t31774Z' => 'bra', 'BraA09t41378Z' => 'bra', 'BraA10t45270Z' => 'bra', 'C02p01550' => 'bna', 'C02p21420' => 'bna', 'C02p34240' => 'bna', 'C03p01750' => 'bna', 'C03p31810' => 'bna', 'C03p64910' => 'bna', 'C04p21000' => 'bna', 'C04p24030' => 'bna', 'C04p56850' => 'bna', 'C05p16420' => 'bna', 'C06p39080' => 'bna', 'C06p51050' => 'bna', 'C08p43530' => 'bna', 'C09p73100' => 'bna', 'CAN.G1129.23' => 'can', 'CAN.G1310.12' => 'can', 'CAN.G166.4' => 'can', 'CAN.G2174.2' => 'can', 'CAN.G321.10' => 'can', 'CAN.G321.11' => 'can', 'CAN.G321.8' => 'can', 'CAN.G321.9' => 'can', 'CAN.G3532.1' => 'can', 'CAN.G397.24' => 'can', 'CAN.G424.30' => 'can', 'CAN.G694.30' => 'can', 'CAN.G856.7' => 'can', 'CAN.G919.24' => 'can', 'CANSAT21G0212' => 'cansat', 'CANSAT21G0359' => 'cansat', 'CANSAT25G1857' => 'cansat', 'CANSAT25G3516' => 'cansat', 'CANSAT25G3828' => 'cansat', 'CANSAT35G0875' => 'cansat', 'CANSAT54G1489' => 'cansat', 'CANSAT56G2103' => 'cansat', 'CANSAT64G2739' => 'cansat', 'CANSAT80G0677' => 'cansat', 'CANSAT80G1669' => 'cansat', 'CANSAT80G2778' => 'cansat', 'CARHR018690' => 'chi', 'CARHR057150' => 'chi', 'CARHR121450' => 'chi', 'CARHR209420' => 'chi', 'CARHR227200' => 'chi', 'CARHR275830' => 'chi', 'Carub.0001s1777' => 'cru', 'Carub.0002s1121' => 'cru', 'Carub.0004s0821' => 'cru', 'Carub.0006s0277' => 'cru', 'Carub.0007s2079' => 'cru', 'Carub.0008s2272' => 'cru', 'Ca_03190_v3' => 'car', 'Ca_04504_v3' => 'car', 'Ca_08252_v3' => 'car', 'Ca_16020_v3' => 'car', 'Ca_17214_v3' => 'car', 'Ca_19884_v3' => 'car', 'CBR_g32487' => 'cbr', 'Cc00_g15660' => 'ccan', 'Cc00_g20960' => 'ccan', 'Cc01_g09330' => 'ccan', 'Cc01_g09340' => 'ccan', 'Cc02_g03240' => 'ccan', 'Cc02_g12320' => 'ccan', 'Cc04_g06560' => 'ccan', 'Cc06_g05650' => 'ccan', 'Cc08_g04690' => 'ccan', 'Cc10_g08600' => 'ccan', 'CDE04G0197' => 'cde', 'CDE04G0870' => 'cde', 'CDE04G1323' => 'cde', 'CDE04G2275' => 'cde', 'CDE04G2824' => 'cde', 'CDE04G2967' => 'cde', 'CDE04G3088' => 'cde', 'CDE05G0938' => 'cde', 'CDE07G0153' => 'cde', 'CDE07G1490' => 'cde', 'CDE07G1997' => 'cde', 'CDE08G0342' => 'cde', 'CDE09G0072' => 'cde', 'CDE12G0184' => 'cde', 'Cfa000340' => 'cfa', 'Cfa006220' => 'cfa', 'Cfa008298' => 'cfa', 'Cfa010033' => 'cfa', 'Cfa016573' => 'cfa', 'Cfa016594' => 'cfa', 'Cfa016595' => 'cfa', 'Cfa019685' => 'cfa', 'Ciclev10006042m.g' => 'ccl', 'Ciclev10009697m.g' => 'ccl', 'Ciclev10012629m.g' => 'ccl', 'Ciclev10012905m.g' => 'ccl', 'Ciclev10013475m.g' => 'ccl', 'Ciclev10013731m.g' => 'ccl', 'Ciclev10016917m.g' => 'ccl', 'Ciclev10029782m.g' => 'ccl', 'CiPaw.03G104100' => 'cil', 'CiPaw.04G066000' => 'cil', 'CiPaw.07G085000' => 'cil', 'CiPaw.07G085100' => 'cil', 'CiPaw.09G012900' => 'cil', 'CiPaw.09G157300' => 'cil', 'CiPaw.10G008600' => 'cil', 'CiPaw.10G008900' => 'cil', 'CiPaw.13G137000' => 'cil', 'CiPaw.14G100900' => 'cil', 'CiPaw.16G091600' => 'cil', 'ClCG02G022150' => 'cla', 'ClCG03G005450' => 'cla', 'ClCG03G010250' => 'cla', 'ClCG04G009990' => 'cla', 'ClCG04G010750' => 'cla', 'ClCG05G007910' => 'cla', 'ClCG10G019050' => 'cla', 'COL.COLO4_14281' => 'col', 'COL.COLO4_16140' => 'col', 'COL.COLO4_19899' => 'col', 'COL.COLO4_29765' => 'col', 'COL.COLO4_31620' => 'col', 'COL.COLO4_31624' => 'col', 'COL.COLO4_32094' => 'col', 'Cpa.g.c32595' => 'cpa', 'Cpa.g.c45053' => 'cpa', 'Cpa.g.sc107.28' => 'cpa', 'Cpa.g.sc3.421' => 'cpa', 'Cpa.g.sc32.19' => 'cpa', 'Cpa.g.sc3387.2' => 'cpa', 'CsaV3_1G011710' => 'csa', 'CsaV3_1G044210' => 'csa', 'CsaV3_3G016930' => 'csa', 'CsaV3_3G037190' => 'csa', 'CsaV3_3G038840' => 'csa', 'CsaV3_6G014990' => 'csa', 'CsaV3_6G040640' => 'csa', 'CSS0008060' => 'camsi', 'CSS0009521' => 'camsi', 'CSS0010686' => 'camsi', 'CSS0010709' => 'camsi', 'CSS0013303' => 'camsi', 'CSS0021366' => 'camsi', 'CSS0022933' => 'camsi', 'CSS0032358' => 'camsi', 'CSS0040943' => 'camsi', 'CSS0044858' => 'camsi', 'CSS0044898' => 'camsi', 'CSS0048985' => 'camsi', 'CSS0050083' => 'camsi', 'DCAR_006159' => 'dca', 'DCAR_009158' => 'dca', 'DCAR_010360' => 'dca', 'DCAR_012187' => 'dca', 'DCAR_014797' => 'dca', 'DCAR_020239' => 'dca', 'DCAR_023904' => 'dca', 'Dinv01480' => 'din', 'Dinv17128' => 'din', 'Dinv18983' => 'din', 'Dinv28462' => 'din', 'Dinv29077' => 'din', 'Dinv29468' => 'din', 'Dinv31676' => 'din', 'Dinv35195' => 'din', 'Dinv42564' => 'din', 'Duzib068G0193' => 'dzi', 'Duzib068G1406' => 'dzi', 'Duzib084G0171' => 'dzi', 'Duzib093G1707' => 'dzi', 'Duzib128G0843' => 'dzi', 'Duzib128G0905' => 'dzi', 'Duzib150G0180' => 'dzi', 'Duzib160G0531' => 'dzi', 'Duzib177G0390' => 'dzi', 'Duzib205G0242' => 'dzi', 'ECA232G0486' => 'eca', 'ECA232G2686' => 'eca', 'ECA238G0395' => 'eca', 'ECA238G1921' => 'eca', 'ECA238G4069' => 'eca', 'EL10Ac3g05715' => 'bvu', 'EL10Ac4g10025' => 'bvu', 'EL10Ac6g13314' => 'bvu', 'EL10Ac7g15814' => 'bvu', 'EL10Ac7g16930' => 'bvu', 'EL10Ac8g20548' => 'bvu', 'EL10Ac8g20549' => 'bvu', 'EL10Ac9g21401' => 'bvu', 'Eucgr.A01505' => 'egr', 'Eucgr.B00867' => 'egr', 'Eucgr.B01458' => 'egr', 'Eucgr.B03867' => 'egr', 'Eucgr.J00485' => 'egr', 'Eucgr.K00237' => 'egr', 'FAN01G2813' => 'fan', 'FAN02G3134' => 'fan', 'FAN02G3270' => 'fan', 'FAN03G1378' => 'fan', 'FAN03G1691' => 'fan', 'FAN04G1984' => 'fan', 'FAN05G3778' => 'fan', 'FAN06G3740' => 'fan', 'FAN06G4075' => 'fan', 'FAN08G3325' => 'fan', 'FAN09G0891' => 'fan', 'FAN09G2612' => 'fan', 'FAN10G3786' => 'fan', 'FAN11G1721' => 'fan', 'FAN11G2985' => 'fan', 'FAN12G2932' => 'fan', 'FAN13G0788' => 'fan', 'FAN14G0022' => 'fan', 'FAN14G2505' => 'fan', 'FAN16G0441' => 'fan', 'FAN17G3092' => 'fan', 'FAN18G2994' => 'fan', 'FAN21G1529' => 'fan', 'FAN21G2479' => 'fan', 'FAN25G1691' => 'fan', 'FAN25G3782' => 'fan', 'FvH4_3g09870' => 'fve', 'FvH4_3g24700' => 'fve', 'FvH4_4g30710' => 'fve', 'FvH4_5g17130' => 'fve', 'FvH4_6g00090' => 'fve', 'FvH4_6g18480' => 'fve', 'FvH4_7g29150' => 'fve', 'Glyma.02G069200' => 'gma', 'Glyma.02G069500' => 'gma', 'Glyma.03G194700' => 'gma', 'Glyma.05G244100' => 'gma', 'Glyma.08G363100' => 'gma', 'Glyma.09G143500' => 'gma', 'Glyma.10G071400' => 'gma', 'Glyma.12G184000' => 'gma', 'Glyma.13G153086' => 'gma', 'Glyma.13G317100' => 'gma', 'Glyma.16G044100' => 'gma', 'Glyma.16G044200' => 'gma', 'Glyma.16G150700' => 'gma', 'Glyma.16G151000' => 'gma', 'Glyma.16G196300' => 'gma', 'Glyma.18G298800' => 'gma', 'Glyma.18G298900' => 'gma', 'Glyma.18G299000' => 'gma', 'Glyma.19G108100' => 'gma', 'Glyma.19G108200' => 'gma', 'Glyma.19G194300' => 'gma', 'Gohir.A04G064270' => 'ghi', 'Gohir.A05G166400' => 'ghi', 'Gohir.A07G109700' => 'ghi', 'Gohir.A08G100900' => 'ghi', 'Gohir.A08G227700' => 'ghi', 'Gohir.A09G138800' => 'ghi', 'Gohir.A09G175400' => 'ghi', 'Gohir.A11G009900' => 'ghi', 'Gohir.D04G100700' => 'ghi', 'Gohir.D05G169400' => 'ghi', 'Gohir.D07G113500' => 'ghi', 'Gohir.D08G112000' => 'ghi', 'Gohir.D08G248000' => 'ghi', 'Gohir.D09G135900' => 'ghi', 'Gohir.D09G170700' => 'ghi', 'Gohir.D11G009200' => 'ghi', 'Gorai.001G121800' => 'gra', 'Gorai.004G120400' => 'gra', 'Gorai.004G264600' => 'gra', 'Gorai.006G155800' => 'gra', 'Gorai.006G192300' => 'gra', 'Gorai.007G010800' => 'gra', 'Gorai.009G174600' => 'gra', 'Gorai.009G403800' => 'gra', 'GSVIVG01003663001' => 'vvi', 'GSVIVG01008404001' => 'vvi', 'GSVIVG01010598001' => 'vvi', 'GSVIVG01033829001' => 'vvi', 'GSVIVG01036145001' => 'vvi', 'HanXRQChr01g0024111' => 'han', 'HanXRQChr06g0181191' => 'han', 'HanXRQChr06g0183471' => 'han', 'HanXRQChr06g0183481' => 'han', 'HanXRQChr07g0197921' => 'han', 'HanXRQChr07g0206891' => 'han', 'HanXRQChr07g0207081' => 'han', 'HanXRQChr08g0220851' => 'han', 'HanXRQChr08g0220861' => 'han', 'HanXRQChr08g0234381' => 'han', 'HanXRQChr11g0351631' => 'han', 'HanXRQChr13g0393741' => 'han', 'HanXRQChr13g0393751' => 'han', 'HanXRQChr13g0399101' => 'han', 'HanXRQChr14g0462261' => 'han', 'Haze_04607' => 'cav', 'Haze_06591' => 'cav', 'Haze_13737' => 'cav', 'Haze_18804' => 'cav', 'Haze_19595' => 'cav', 'Haze_19596' => 'cav', 'Haze_23391' => 'cav', 'Hma1.2p1_0084F.1_g043650' => 'hma', 'Hma1.2p1_0270F.1_g108270' => 'hma', 'Hma1.2p1_0578F.1_g182410' => 'hma', 'Hma1.2p1_0620F.1_g190510' => 'hma', 'Hma1.2p1_0620F.1_g190515' => 'hma', 'Hma1.2p1_0669F.1_g200260' => 'hma', 'HPP92_003075' => 'vpl', 'HPP92_003617' => 'vpl', 'HPP92_007609' => 'vpl', 'HPP92_007816' => 'vpl', 'HPP92_008729' => 'vpl', 'HPP92_008730' => 'vpl', 'HPP92_008989' => 'vpl', 'HPP92_008998' => 'vpl', 'HPP92_023014' => 'vpl', 'HPP92_023707' => 'vpl', 'HPP92_024027' => 'vpl', 'HPP92_028566' => 'vpl', 'Hund02331' => 'sun', 'Hund09714' => 'sun', 'Hund11757' => 'sun', 'Hund18751' => 'sun', 'Hund19946' => 'sun', 'Hund21285' => 'sun', 'Hund21287' => 'sun', 'Hund23592' => 'sun', 'Hund28783' => 'sun', 'Lalb_Chr00c36g0408771' => 'lal', 'Lalb_Chr01g0018201' => 'lal', 'Lalb_Chr01g0018211' => 'lal', 'Lalb_Chr02g0156991' => 'lal', 'Lalb_Chr03g0034411' => 'lal', 'Lalb_Chr05g0221851' => 'lal', 'Lalb_Chr09g0331841' => 'lal', 'Lalb_Chr09g0331851' => 'lal', 'Lalb_Chr14g0364281' => 'lal', 'Lalb_Chr20g0111861' => 'lal', 'Lalb_Chr20g0122351' => 'lal', 'Lalb_Chr21g0317011' => 'lal', 'Lalb_Chr21g0317021' => 'lal', 'Lalb_Chr24g0392921' => 'lal', 'Lalb_Chr25g0288371' => 'lal', 'Lj1A238G18' => 'lonja', 'Lj1A582G6' => 'lonja', 'Lj1A994T60' => 'lonja', 'Lj1g0002301' => 'lja', 'Lj1g0004485' => 'lja', 'Lj1g0012964' => 'lja', 'Lj1g0015539' => 'lja', 'Lj1g0023267' => 'lja', 'Lj2A135T56' => 'lonja', 'Lj2C978T7' => 'lonja', 'Lj2g0019038' => 'lja', 'Lj2g0022162' => 'lja', 'Lj3g0017278' => 'lja', 'Lj4g0006555' => 'lja', 'Lj5A155T100' => 'lonja', 'Lj5g0005131' => 'lja', 'Lsat_1_v5_gn_0_10801' => 'lsa', 'Lsat_1_v5_gn_0_18460' => 'lsa', 'Lsat_1_v5_gn_1_61601' => 'lsa', 'Lsat_1_v5_gn_1_61621' => 'lsa', 'Lsat_1_v5_gn_2_134000' => 'lsa', 'Lsat_1_v5_gn_2_17881' => 'lsa', 'Lsat_1_v5_gn_2_96360' => 'lsa', 'Lsat_1_v5_gn_8_7181' => 'lsa', 'Manes.04G004700' => 'mes', 'Manes.06G008200' => 'mes', 'Manes.08G024500' => 'mes', 'Manes.09G056300' => 'mes', 'Manes.11G161100' => 'mes', 'Manes.12G001600' => 'mes', 'Manes.13G000800' => 'mes', 'Manes.13G011900' => 'mes', 'Manes.14G027800' => 'mes', 'Manes.16G019600' => 'mes', 'Mapoly0005s0037' => 'mpo', 'Mapoly0026s0106' => 'mpo', 'MBI08_g18566_MAGBIO' => 'mbi', 'MBI12_g43905_MAGBIO' => 'mbi', 'MBI16_g23752_MAGBIO' => 'mbi', 'MBI16_g46427_MAGBIO' => 'mbi', 'MBI17_g01580_MAGBIO' => 'mbi', 'MD01G1198400' => 'mdo', 'MD03G1143000' => 'mdo', 'MD06G1229900' => 'mdo', 'MD07G1265900' => 'mdo', 'MD11G1163500' => 'mdo', 'MD12G1023900' => 'mdo', 'MD12G1262000' => 'mdo', 'MD14G1021100' => 'mdo', 'Medtr0020s0120' => 'mtr', 'Medtr1g060190' => 'mtr', 'Medtr2g086270' => 'mtr', 'Medtr5g078320' => 'mtr', 'Medtr6g033040' => 'mtr', 'Medtr7g006630' => 'mtr', 'Medtr7g006690' => 'mtr', 'Medtr7g025450' => 'mtr', 'Medtr7g052830' => 'mtr', 'Medtr7g084970' => 'mtr', 'Medtr7g085020' => 'mtr', 'Medtr7g085040' => 'mtr', 'Medtr7g104460' => 'mtr', 'Medtr8g106840' => 'mtr', 'MELO3C002550.2' => 'cme', 'MELO3C006888.2' => 'cme', 'MELO3C009465.2' => 'cme', 'MELO3C009627.2' => 'cme', 'MELO3C010015.2' => 'cme', 'MELO3C021426.2' => 'cme', 'MELO3C024540.2' => 'cme', 'MELO3C028498.2' => 'cme', 'Migut.C00085' => 'egut', 'Migut.D02356' => 'egut', 'Migut.F00359' => 'egut', 'Migut.F01843' => 'egut', 'Migut.F02091' => 'egut', 'Migut.F02093' => 'egut', 'Migut.G00570' => 'egut', 'Migut.I00318' => 'egut', 'Migut.I00451' => 'egut', 'Migut.J01049' => 'egut', 'Migut.M00325' => 'egut', 'Migut.M00905' => 'egut', 'Migut.M01225' => 'egut', 'Migut.N02493' => 'egut', 'MSTRG.19257' => 'ama', 'MSTRG.21047' => 'ama', 'MSTRG.27412' => 'ama', 'MSTRG.339' => 'ama', 'MSTRG.7491' => 'ama', 'Nitab4.5_0000132g0020' => 'nta', 'Nitab4.5_0000161g0050' => 'nta', 'Nitab4.5_0000161g0090' => 'nta', 'Nitab4.5_0000234g0200' => 'nta', 'Nitab4.5_0000351g0250' => 'nta', 'Nitab4.5_0000649g0080' => 'nta', 'Nitab4.5_0000751g0180' => 'nta', 'Nitab4.5_0000819g0010' => 'nta', 'Nitab4.5_0000971g0160' => 'nta', 'Nitab4.5_0001003g0140' => 'nta', 'Nitab4.5_0001003g0220' => 'nta', 'Nitab4.5_0001600g0060' => 'nta', 'Nitab4.5_0001644g0120' => 'nta', 'Nitab4.5_0001725g0080' => 'nta', 'Nitab4.5_0001986g0140' => 'nta', 'Nitab4.5_0002002g0110' => 'nta', 'Nitab4.5_0002260g0240' => 'nta', 'Nitab4.5_0003472g0020' => 'nta', 'Nitab4.5_0003795g0030' => 'nta', 'Nitab4.5_0003848g0050' => 'nta', 'Nitab4.5_0003870g0010' => 'nta', 'Nitab4.5_0004480g0050' => 'nta', 'Nitab4.5_0005355g0050' => 'nta', 'Nitab4.5_0006040g0010' => 'nta', 'Nitab4.5_0006714g0010' => 'nta', 'Nitab4.5_0008012g0010' => 'nta', 'Nitab4.5_0008012g0020' => 'nta', 'Nitab4.5_0008136g0010' => 'nta', 'Nitab4.5_0008339g0010' => 'nta', 'Nitab4.5_0008339g0030' => 'nta', 'Nitab4.5_0008924g0020' => 'nta', 'Nitab4.5_0010534g0010' => 'nta', 'Nitab4.5_0011525g0020' => 'nta', 'Nitab4.5_0018102g0010' => 'nta', 'Nn019s41475' => 'nnu', 'Nn042s41804' => 'nnu', 'Nn1g01394' => 'nnu', 'Nn1g03294' => 'nnu', 'Nn1g03852' => 'nnu', 'Nn1g06813' => 'nnu', 'Nn1g07976' => 'nnu', 'Nn1g07986' => 'nnu', 'Nn1g09579' => 'nnu', 'Nn1g09590' => 'nnu', 'Nn1g09596' => 'nnu', 'Nn1g09747' => 'nnu', 'Nn1g09772' => 'nnu', 'Nn2g14132' => 'nnu', 'Nn3g18229' => 'nnu', 'Nn4g24160' => 'nnu', 'Nn6g33317' => 'nnu', 'Nn6g34211' => 'nnu', 'Nn6g34933' => 'nnu', 'Oeu007682.1' => 'oeu', 'Oeu011741.1' => 'oeu', 'Oeu014898.1' => 'oeu', 'Oeu026191.1' => 'oeu', 'Oeu026302.1' => 'oeu', 'Oeu030050.1' => 'oeu', 'Oeu034847.1' => 'oeu', 'Oeu042714.1' => 'oeu', 'Oeu043693.1' => 'oeu', 'Oeu047196.1' => 'oeu', 'Oeu051613.2' => 'oeu', 'Oeu056235.1' => 'oeu', 'Oeu058247.1' => 'oeu', 'Oeu059550.1' => 'oeu', 'Oeu062033.1' => 'oeu', 'Os01g0111600' => 'osa', 'Os01g0202700' => 'osa', 'Os01g0748800' => 'osa', 'Os02g0232300' => 'osa', 'Os02g0531600' => 'osa', 'Os04g0411400' => 'osa', 'Os04g0488400' => 'osa', 'Os05g0518000' => 'osa', 'Os06g0157500' => 'osa', 'Os06g0157700' => 'osa', 'Os06g0498800' => 'osa', 'Os06g0552900' => 'osa', 'Os09g0513500' => 'osa', 'Os11g0152500' => 'osa', 'Os11g0293800' => 'osa', 'Os12g0152000' => 'osa', 'Os12g0232300' => 'osa', 'Peaxi162Scf00040g02110' => 'pax', 'Peaxi162Scf00091g00096' => 'pax', 'Peaxi162Scf00132g01513' => 'pax', 'Peaxi162Scf00163g00521' => 'pax', 'Peaxi162Scf00253g00619' => 'pax', 'Peaxi162Scf00254g00104' => 'pax', 'Peaxi162Scf00254g00105' => 'pax', 'Peaxi162Scf00254g00117' => 'pax', 'Peaxi162Scf00254g00121' => 'pax', 'Peaxi162Scf00254g00126' => 'pax', 'Peaxi162Scf00254g00129' => 'pax', 'Peaxi162Scf00423g00725' => 'pax', 'Peaxi162Scf00658g00029' => 'pax', 'Peaxi162Scf00683g00156' => 'pax', 'Peaxi162Scf00915g00125' => 'pax', 'Peaxi162Scf01281g00001' => 'pax', 'Peaxi162Scf01324g00006' => 'pax', 'Peaxi162Scf01391g00114' => 'pax', 'PGR004G0771' => 'pgr', 'PGR031G0946' => 'pgr', 'PGR083G1431' => 'pgr', 'PGR102G1127' => 'pgr', 'PGR119G1961' => 'pgr', 'PGR142G3807' => 'pgr', 'PGSC0003DMG400005654' => 'stu', 'PGSC0003DMG400007111' => 'stu', 'PGSC0003DMG400011707' => 'stu', 'PGSC0003DMG400011709' => 'stu', 'PGSC0003DMG400014322' => 'stu', 'PGSC0003DMG400016179' => 'stu', 'PGSC0003DMG400016180' => 'stu', 'PGSC0003DMG400023365' => 'stu', 'PGSC0003DMG400040097' => 'stu', 'Phvul.001G097200' => 'pvu', 'Phvul.001G097300' => 'pvu', 'Phvul.001G189200' => 'pvu', 'Phvul.002G327700' => 'pvu', 'Phvul.004G074700' => 'pvu', 'Phvul.004G119700' => 'pvu', 'Phvul.005G124600' => 'pvu', 'Phvul.007G229300' => 'pvu', 'Phvul.008G003700' => 'pvu', 'Phvul.008G003800' => 'pvu', 'Potri.004G203900' => 'ptr', 'Potri.008G077700' => 'ptr', 'Potri.009G165100' => 'ptr', 'Potri.010G179700' => 'ptr', 'Potri.010G179801' => 'ptr', 'Potri.010G179900' => 'ptr', 'Potri.015G041000' => 'ptr', 'Potri.015G141300' => 'ptr', 'Pp3c10_23660' => 'ppa', 'Pp3c14_18740' => 'ppa', 'Pp3c17_21080' => 'ppa', 'Pp3c1_41080' => 'ppa', 'Pp3c2_1570' => 'ppa', 'Pp3c2_36090' => 'ppa', 'Prupe.2G291900' => 'ppe', 'Prupe.5G230900' => 'ppe', 'Prupe.6G128400' => 'ppe', 'Prupe.6G364900' => 'ppe', 'Prupe.7G112600' => 'ppe', 'Psat0s3447g0040' => 'psa', 'Psat0s4214g0120' => 'psa', 'Psat1g096760' => 'psa', 'Psat3g033760' => 'psa', 'Psat3g090680' => 'psa', 'Psat3g090720' => 'psa', 'Psat3g091040' => 'psa', 'Psat3g206800' => 'psa', 'Psat3g206880' => 'psa', 'Psat5g256920' => 'psa', 'Psat6g013960' => 'psa', 'Psat7g000240' => 'psa', 'Psat7g000280' => 'psa', 'PSO017G1545' => 'pso', 'PSO017G7013' => 'pso', 'PSO017G7122' => 'pso', 'PSO050G0002' => 'pso', 'PSO308G0001' => 'pso', 'PSO339G0259' => 'pso', 'PSO339G5632' => 'pso', 'PSO384G0038' => 'pso', 'PSO478G1183' => 'pso', 'PSO478G4593' => 'pso', 'PSO541G2688' => 'pso', 'PSO541G5743' => 'pso', 'PSO675G4233' => 'pso', 'PSO675G5719' => 'pso', 'PSO675G8309' => 'pso', 'PSO675G8559' => 'pso', 'PSO675G8769' => 'pso', 'PSO724G0834' => 'pso', 'PSO782G3789' => 'pso', 'QL01p012439' => 'qlo', 'QL01p051503' => 'qlo', 'QL05p080976' => 'qlo', 'QL07p039270' => 'qlo', 'QL09p014666' => 'qlo', 'QL10p028022' => 'qlo', 'RcHm_v2.0_Chr1g0376941' => 'rch', 'RcHm_v2.0_Chr3g0447431' => 'rch', 'RcHm_v2.0_Chr3g0473011' => 'rch', 'RcHm_v2.0_Chr3g0473021' => 'rch', 'RcHm_v2.0_Chr4g0439111' => 'rch', 'RcHm_v2.0_Chr5g0044251' => 'rch', 'RcHm_v2.0_Chr6g0284341' => 'rch', 'RcHm_v2.0_Chr7g0178661' => 'rch', 'Rhsim01G0205600' => 'rsi', 'Rhsim03G0076300' => 'rsi', 'Rhsim05G0164200' => 'rsi', 'Rhsim09G0128200' => 'rsi', 'Rhsim09G0128300' => 'rsi', 'Rhsim12G0139500' => 'rsi', 'Sabra04G0137900' => 'sbr', 'Sabra08G0057800' => 'sbr', 'Sabra09G0129100' => 'sbr', 'Sabra10G0137900' => 'sbr', 'Sabra12G0104400' => 'sbr', 'Sabra15G0056300' => 'sbr', 'Sabra15G0064000' => 'sbr', 'Sabra15G0151800' => 'sbr', 'SalBow3G0168' => 'sbo', 'SalBow3G0804' => 'sbo', 'SalBow3G1284' => 'sbo', 'SalBow3G2175' => 'sbo', 'SalBow4G3171' => 'sbo', 'SalBow6G5187' => 'sbo', 'SalBow8G0766' => 'sbo', 'SalBow8G1521' => 'sbo', 'SalBow8G4235' => 'sbo', 'Sc06g0004920' => 'sci', 'Sc07g0005560' => 'sci', 'Sc12g0004470' => 'sci', 'Sc12g0007130' => 'sci', 'Sc16g0000700' => 'sci', 'Sc16g0010630' => 'sci', 'Sc17g0006720' => 'sci', 'Sc17g0006730' => 'sci', 'Sc21g0007150' => 'sci', 'Sc25g0000400' => 'sci', 'Sed0000265' => 'sed', 'Sed0000492' => 'sed', 'Sed0001666' => 'sed', 'Sed0005268' => 'sed', 'Sed0005527' => 'sed', 'Sed0006003' => 'sed', 'Sed0012908' => 'sed', 'Sed0015666' => 'sed', 'SEGI_00128' => 'sgi', 'SEGI_01677' => 'sgi', 'SEGI_01817' => 'sgi', 'SEGI_02582' => 'sgi', 'SEGI_06337' => 'sgi', 'SEGI_10607' => 'sgi', 'SEGI_12963' => 'sgi', 'SEGI_14992' => 'sgi', 'SEGI_16954' => 'sgi', 'SEGI_24711' => 'sgi', 'SEGI_25138' => 'sgi', 'SEGI_26127' => 'sgi', 'SEGI_28616' => 'sgi', 'SEGI_28881' => 'sgi', 'SEGI_29449' => 'sgi', 'SEGI_30375' => 'sgi', 'SEGI_33582' => 'sgi', 'SEGI_33933' => 'sgi', 'SEGI_36356' => 'sgi', 'SEGI_38111' => 'sgi', 'SEGI_39259' => 'sgi', 'SEGI_41186' => 'sgi', 'SGA_v2.0_scaffold122G33207' => 'sas', 'SGA_v2.0_scaffold13G06734' => 'sas', 'SGA_v2.0_scaffold1G00183' => 'sas', 'SGA_v2.0_scaffold22G09871' => 'sas', 'SGA_v2.0_scaffold25G10970' => 'sas', 'SGA_v2.0_scaffold2G01068' => 'sas', 'SGA_v2.0_scaffold7G03926' => 'sas', 'SHI18995' => 'shi', 'SMO239G0202' => 'smo', 'SMO307G0039' => 'smo', 'SMO358G0525' => 'smo', 'SMO365G0072' => 'smo', 'Solyc01g009560.2' => 'sly', 'Solyc01g009580.2' => 'sly', 'Solyc02g079290.3' => 'sly', 'Solyc03g026050.3' => 'sly', 'Solyc03g063100.2' => 'sly', 'Solyc03g119100.2' => 'sly', 'Solyc05g053850.3' => 'sly', 'Solyc05g055660.3' => 'sly', 'Solyc06g074350.3' => 'sly', 'Solyc09g009560.2' => 'sly', 'Solyc11g008640.1' => 'sly', 'Solyc11g008650.1' => 'sly', 'Sopen01g005090' => 'spe', 'Sopen01g005110' => 'spe', 'Sopen02g024110' => 'spe', 'Sopen03g004880' => 'spe', 'Sopen03g015390' => 'spe', 'Sopen03g037990' => 'spe', 'Sopen05g032320' => 'spe', 'Sopen05g034090' => 'spe', 'Sopen06g030810' => 'spe', 'Sopen09g004300' => 'spe', 'Sopen11g004430' => 'spe', 'Sopen11g004440' => 'spe', 'Sp1g16120' => 'spa', 'Sp2g25210' => 'spa', 'Sp4g10370' => 'spa', 'Sp5g20330' => 'spa', 'Sp5g32040' => 'spa', 'Sp6g38890' => 'spa', 'Sp7g18730' => 'spa', 'TAR362G0270' => 'tar', 'TAR374G1533' => 'tar', 'TAR375G0785' => 'tar', 'TAR629G1356' => 'tar', 'TAR629G2268' => 'tar', 'TAR629G2399' => 'tar', 'TAR633G0047' => 'tar', 'TAR633G0836' => 'tar', 'TAR633G2697' => 'tar', 'TAR636G0137' => 'tar', 'THA.LOC104800535' => 'tha', 'THA.LOC104801841' => 'tha', 'THA.LOC104812162' => 'tha', 'THA.LOC104816388' => 'tha', 'THA.LOC104821993' => 'tha', 'THA.LOC104823817' => 'tha', 'THA.LOC104826420' => 'tha', 'Thecc.03G052300' => 'tca', 'Thecc.03G172800' => 'tca', 'Thecc.05G087500' => 'tca', 'Thecc.05G111400' => 'tca', 'Thecc.06G201400' => 'tca', 'Thecc.09G285500' => 'tca', 'Thhalv10002980m.g' => 'esa', 'Thhalv10005589m.g' => 'esa', 'Thhalv10009636m.g' => 'esa', 'Thhalv10015708m.g' => 'esa', 'Thhalv10017312m.g' => 'esa', 'Thhalv10019213m.g' => 'esa', 'Thhalv10019214m.g' => 'esa', 'Thhalv10027204m.g' => 'esa', 'TPR.G10735' => 'tpr', 'TPR.G11447' => 'tpr', 'TPR.G12915' => 'tpr', 'TPR.G19542' => 'tpr', 'TPR.G20910' => 'tpr', 'TPR.G4581' => 'tpr', 'TPR.G5857' => 'tpr', 'TPR.G5891' => 'tpr', 'TPR.G5893' => 'tpr', 'TPR.G6052' => 'tpr', 'TPR.G9695' => 'tpr', 'TPR.G9709' => 'tpr', 'TWI18G0924' => 'twi', 'TWI31G1201' => 'twi', 'TWI38G0106' => 'twi', 'TWI39G0677' => 'twi', 'TWI53G0743' => 'twi', 'TWI75G1383' => 'twi', 'TWI77G0628' => 'twi', 'TWI81G0942' => 'twi', 'unitig_32.g11447' => 'ugi', 'unitig_32.g11451' => 'ugi', 'unitig_46.g18249' => 'ugi', 'unitig_578.g15752' => 'ugi', 'unitig_60.g25599' => 'ugi', 'unitig_749.g13416' => 'ugi', 'unitig_749.g14297' => 'ugi', 'unitig_8.g3872' => 'ugi', 'unitig_8.g4309' => 'ugi', 'unitig_899.g15373' => 'ugi', 'vmacro06702' => 'vma', 'vmacro07402' => 'vma', 'vmacro09845' => 'vma', 'vmacro10418' => 'vma', 'vmacro14346' => 'vma', 'vmacro16421' => 'vma', 'vmacro17788' => 'vma', 'vmacro19616' => 'vma', 'vmacro22508' => 'vma', 'VMungo0251G0288' => 'vmu', 'VMungo0380G0001' => 'vmu', 'VMungo0464G1305' => 'vmu', 'VMungo0464G2036' => 'vmu', 'VMungo0720G1224' => 'vmu', 'VMungo1080G0172' => 'vmu', 'VMungo1383G1140' => 'vmu', 'VMungo1383G1180' => 'vmu', 'VMungo1383G1307' => 'vmu', 'VMungo1383G2710' => 'vmu', 'VMungo1383G3328' => 'vmu', 'Zm00001eb078980' => 'zma', 'Zm00001eb084030' => 'zma', 'Zm00001eb085740' => 'zma', 'Zm00001eb090320' => 'zma', 'Zm00001eb102650' => 'zma', 'Zm00001eb126300' => 'zma', 'Zm00001eb153190' => 'zma', 'Zm00001eb164120' => 'zma', 'Zm00001eb181410' => 'zma', 'Zm00001eb197000' => 'zma', 'Zm00001eb239360' => 'zma', 'Zm00001eb246470' => 'zma', 'Zm00001eb271180' => 'zma', 'Zm00001eb281410' => 'zma', 'Zm00001eb293080' => 'zma', 'Zm00001eb318290' => 'zma', 'Zm00001eb334510' => 'zma', 'Zm00001eb338650' => 'zma', 'Zm00001eb353250' => 'zma', 'Zm00001eb384770' => 'zma', 'Zm00001eb406740' => 'zma', 'Zm00001eb411580' => 'zma', 'Zm00001eb425430' => 'zma' ) $gf_id = 'HOM05D000543' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000543' ) $data_identifier = 'HOM05D000543' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 26, 'aar' => (int) 6, 'aag' => (int) 5, 'ach' => (int) 11, 'amhyb' => (int) 5, 'aly' => (int) 7, 'aox' => (int) 7, 'arhy' => (int) 31, 'ath' => (int) 6, 'atr' => (int) 6, 'acertr' => (int) 7, 'cqu' => (int) 23, 'bca' => (int) 20, 'bol' => (int) 14, 'bra' => (int) 12, 'can' => (int) 14, 'cansat' => (int) 12, 'chi' => (int) 6, 'cru' => (int) 6, 'car' => (int) 6, 'cbr' => (int) 1, 'ccan' => (int) 10, 'cde' => (int) 14, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 11, 'cla' => (int) 7, 'col' => (int) 7, 'cpa' => (int) 6, 'csa' => (int) 7, 'camsi' => (int) 13, 'dca' => (int) 7, 'din' => (int) 9, 'dzi' => (int) 10, 'eca' => (int) 5, 'bvu' => (int) 8, 'egr' => (int) 6, 'fan' => (int) 26, 'fve' => (int) 7, 'gma' => (int) 21, 'ghi' => (int) 16, 'gra' => (int) 8, 'vvi' => (int) 5, 'han' => (int) 15, 'cav' => (int) 7, 'hma' => (int) 6, 'vpl' => (int) 12, 'sun' => (int) 9, 'lal' => (int) 15, 'lonja' => (int) 6, 'lja' => (int) 10, 'lsa' => (int) 8, 'mes' => (int) 10, 'mpo' => (int) 2, 'mbi' => (int) 5, 'mdo' => (int) 8, 'mtr' => (int) 14, 'cme' => (int) 8, 'egut' => (int) 14, 'ama' => (int) 5, 'nta' => (int) 34, 'nnu' => (int) 19, 'oeu' => (int) 15, 'osa' => (int) 17, 'pax' => (int) 18, 'pgr' => (int) 6, 'stu' => (int) 9, 'pvu' => (int) 10, 'ptr' => (int) 8, 'ppa' => (int) 6, 'ppe' => (int) 5, 'psa' => (int) 13, 'pso' => (int) 19, 'qlo' => (int) 6, 'rch' => (int) 8, 'rsi' => (int) 6, 'sbr' => (int) 8, 'sbo' => (int) 9, 'sci' => (int) 10, 'sed' => (int) 8, 'sgi' => (int) 22, 'sas' => (int) 7, 'shi' => (int) 1, 'smo' => (int) 4, 'sly' => (int) 12, 'spe' => (int) 12, 'spa' => (int) 7, 'tar' => (int) 10, 'tha' => (int) 7, 'tca' => (int) 6, 'esa' => (int) 8, 'tpr' => (int) 12, 'twi' => (int) 8, 'ugi' => (int) 10, 'vma' => (int) 9, 'vmu' => (int) 11, 'zma' => (int) 23 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb425430' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1